AlphaFold Archives - Laboratory Notes https://www.laboratorynotes.com/tag/alphafold/ Wed, 23 Sep 2026 23:18:25 +0000 en hourly 1 https://wordpress.org/?v=7.1.1 Structural Alignment: Comparing Protein Structures https://www.laboratorynotes.com/structural-alignment-comparing-protein-structures/ https://www.laboratorynotes.com/structural-alignment-comparing-protein-structures/#respond Wed, 23 Sep 2026 23:18:25 +0000 https://www.laboratorynotes.com/?p=31876 Structural alignment compares protein structures in three dimensions to identify conserved folds, domains, functional sites and evolutionary relationships. Learn how RMSD, TM-score and structural comparison tools reveal similarities and differences between proteins.

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]]> https://www.laboratorynotes.com/structural-alignment-comparing-protein-structures/feed/ 0 Protein Structure Database https://www.laboratorynotes.com/protein-structure-database/ https://www.laboratorynotes.com/protein-structure-database/#respond Wed, 23 Sep 2026 22:59:42 +0000 https://www.laboratorynotes.com/?p=31873 Protein structure databases organize experimental and predicted protein structures and provide resources for structural comparison, visualization, functional analysis, and structural bioinformatics.

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]]> https://www.laboratorynotes.com/protein-structure-database/feed/ 0 Protein Structure Prediction https://www.laboratorynotes.com/protein-structure-prediction/ https://www.laboratorynotes.com/protein-structure-prediction/#respond Wed, 23 Sep 2026 21:42:17 +0000 https://www.laboratorynotes.com/?p=31867 Protein structure prediction uses amino acid sequences and evolutionary information to estimate three-dimensional protein structures. Learn about homology modeling, threading, AlphaFold, structural confidence and applications in biology and genetics.

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]]> https://www.laboratorynotes.com/protein-structure-prediction/feed/ 0 AlphaFold https://www.laboratorynotes.com/alphafold/ https://www.laboratorynotes.com/alphafold/#respond Mon, 25 Aug 2025 21:40:24 +0000 https://www.laboratorynotes.com/?p=24129 AlphaFold and other AI-based methods have transformed protein structure prediction by using deep learning and evolutionary information to predict three-dimensional protein structures from amino acid sequences.

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