UBE2A

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  • UBE2A (Ubiquitin-conjugating enzyme E2 A), also known as Rad6A, is a conserved member of the E2 ubiquitin-conjugating enzyme family and a close homolog of UBE2B (Rad6B). Like UBE2B, UBE2A plays essential roles in DNA repair, transcription regulation, and cell cycle control, but it also has unique functions that distinguish it from its paralog. 
  • UBE2A works by transferring ubiquitin from the ubiquitin-activating enzyme (E1) to target proteins, usually in cooperation with specific E3 ligases, thereby modulating protein turnover, chromatin state, or signaling pathways.
  • A hallmark role of UBE2A lies in DNA damage tolerance and genome maintenance. It collaborates with the E3 ligase RAD18 to monoubiquitinate proliferating cell nuclear antigen (PCNA), a critical step in translesion DNA synthesis (TLS). This modification allows DNA polymerases specialized in bypassing damaged bases to replicate across lesions, preventing replication fork stalling and collapse. In addition, UBE2A is involved in the ubiquitination of histone H2B in cooperation with the E3 ligase BRE1, which is vital for chromatin remodeling, transcriptional regulation, and DNA repair. Through these functions, UBE2A helps coordinate the interplay between DNA repair and transcription, maintaining genome stability under both normal and stress conditions.
  • Unlike UBE2B, UBE2A has been more directly linked to neurological development and cognitive function. Mutations or deficiencies in UBE2A are associated with X-linked intellectual disability (XLID), highlighting its importance in brain function. This neurodevelopmental connection likely arises from its role in transcriptional regulation via histone ubiquitination, as well as its participation in neuronal DNA repair and synaptic plasticity. Mouse models have confirmed that loss of UBE2A leads to impaired learning and memory, providing strong evidence for its role in higher-order brain processes.
  • UBE2A also participates in the cell cycle and protein quality control pathways. Similar to UBE2B, it regulates the degradation of key proteins to ensure orderly cell cycle progression. However, studies suggest that UBE2A has a broader regulatory influence on transcription factors and chromatin-modifying enzymes, giving it a dual role in both DNA repair and gene expression. In the context of protein quality control, UBE2A is thought to help prevent accumulation of misfolded or damaged proteins, linking it indirectly to neurodegenerative conditions as well.
  • Clinically, UBE2A’s dysfunction is associated with a spectrum of disorders. Loss-of-function mutations in UBE2A cause X-linked intellectual disability characterized by developmental delay, speech impairment, seizures, and behavioral abnormalities. Overexpression or dysregulation of UBE2A has also been noted in certain cancers, where it may promote uncontrolled cell growth by altering DNA repair capacity or chromatin dynamics. Thus, UBE2A sits at the crossroads of cancer biology, neurobiology, and epigenetics, making it a compelling candidate for therapeutic exploration.
  • Structurally, UBE2A contains the conserved ubiquitin-conjugating (UBC) catalytic domain with the characteristic active-site cysteine essential for ubiquitin transfer. It is highly similar to UBE2B in primary sequence and three-dimensional structure, but subtle differences in its regulatory elements and binding partners confer distinct functional outcomes. For example, UBE2A tends to have stronger associations with chromatin-related processes compared to UBE2B’s stronger role in spermatogenesis.
  • In summary, UBE2A (Rad6A) is a multifunctional E2 enzyme critical for DNA damage tolerance, histone ubiquitination, transcriptional regulation, and neuronal development. While it shares many roles with UBE2B, UBE2A is uniquely associated with cognitive function, and its mutations are a cause of X-linked intellectual disability. Dysregulation of UBE2A contributes to both cancer progression and neurological disease, underscoring its importance as a fundamental regulator of genome stability and brain function.

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